CRAN/E | R Packages from Daniel Osorio

Daniel Osorio

Author of 8 R packages

Quick info

Daniel Osorio has worked on 8 packages so far. In total, Daniel Osorio has worked with 22 other authors on those packages. Impressive teamwork!

Packages overview

Peptides
SCORPION
g2f
minval
rPanglaoDB
retriever
scTenifoldKnk
scTenifoldNet

Package details

Peptides

Calculate Indices and Theoretical Physicochemical Properties of Protein Sequences

Daniel Osorio , Paola Rondon-Villarreal , Rodrigo Torres , J. Sebastian Paez , Luis Pedro Coelho , Richèl J.C. Bilderbeek , Florian C. Sigloch

SCORPION

Single Cell Oriented Reconstruction of PANDA Individual Optimized Networks

Daniel Osorio , Marieke L. Kuijjer

g2f

Find and Fill Gaps in Metabolic Networks

Daniel Osorio , Kelly Botero , Janneth Gonzalez , Andres Pinzon

minval

MINimal VALidation for Stoichiometric Reactions

Daniel Osorio , Janneth Gonzalez , Andres Pinzon

rPanglaoDB

Download and Merge Single-Cell RNA-Seq Data from the PanglaoDB Database

Daniel Osorio , Marieke Kuijjer , James J. Cai

retriever

Generate Disease-Specific Response Signatures from the LINCS-L1000 Data

Daniel Osorio , Marieke Kuijjer

scTenifoldKnk

In-Silico Knockout Experiments from Single-Cell Gene Regulatory Networks

Daniel Osorio , Yan Zhong , Guanxun Li , Qian Xu , Andrew Hillhouse , Jingshu Chen , Laurie Davidson , Yanan Tian , Robert Chapkin , Jianhua Huang , James Cai

scTenifoldNet

Construct and Compare scGRN from Single-Cell Transcriptomic Data

Daniel Osorio , Yan Zhong , Guanxun Li , Jianhua Huang , James Cai

Colleagues

Paola Rondon-Villarreal
Rodrigo Torres
J. Sebastian Paez
Luis Pedro Coelho
Richèl J.C. Bilderbeek
Florian C. Sigloch
Marieke L. Kuijjer
Kelly Botero
Janneth Gonzalez
Andres Pinzon
Marieke Kuijjer
James J. Cai
Yan Zhong
Guanxun Li
Qian Xu
Andrew Hillhouse
Jingshu Chen
Laurie Davidson
Yanan Tian
Robert Chapkin
Jianhua Huang
James Cai